The “Divide by ROIs” feature in MIKAIA’s analysis apps enables users to compile statistics and enhance their understanding of variations in cell populations. This functionality allows for comparisons between user...
Tag - Workflow
MIKAIA University Workflow
Grit Nickel
Getting Started: Activating MIKAIA
In this MIKAIA® University app note, we will walk you through the necessary steps to unlock the features that are locked in MIKAIA® lite. Whether you’re evaluating MIKAIA® studio or have purchased a license...
MIKAIA AI Author: Create New AI and Batch-analyze an Entire Dataset
MIKAIA® AI Author used for Digital Pathology batch analysis
Michaela Benz
MIKAIA Plugin API: “Plug in your own AI”
This app note describes the MIKAIA Plugin API. It can be used by bioinformaticians to plug in their own AI script, e.g., written in Python or any other language, into MIKAIA® and this way put their AI into the hands of...
Volker Bruns
MIKAIA: Build H&E Analysis using Multiple AIs
MIKAIA® is specifically designed for researchers in academia, CROs, biotech, pharma. One of the challenges is that researchers by design do unique things. For this reason, MIKAIA® apps do not represent individual side...
MIKAIA HER2 FISH App
About 20 % to 25 % of breast cancers depend on amplification and overexpression of the gene human epidermal growth factor receptor 2 (HER2). The HER2 overexpression status will initially be assessed by...
Nathalie Falk
MIKAIA Spatial Clustering App
Tumor cells dynamically interact with their microenvironment to stimulate cancer development, progression, and metastasis. To understand the biology of the tumor-immune interactions, it is essential to identify tumoral...
MIKAIA FL Cell Analysis App
MIKAIA® University Application Note: Analyzing multiplexed immuno fluorescent (mIF) slides MIKAIA® has good support for viewing, annotating and analyzing multi-plexed (aka high-plex, aka hyper-plex) whole-slide images...
MIKAIA AI Authoring App
MIKAIA® University Application Note: Interactively training an AI with the AI Authoring App — programming-free and from just a few example annotations By design, researchers often have unique questions that they...
MIKAIA IHC Cell Detection App
MIKAIA® University Application Note: Immune cell infiltration in tumor micro environment (TME) List of other articles on analysis of IHC stains: new (Oct. 2025): IHC Cell Detection App explained (23min video tutorial...
