Digital Pathology Life Science MIKAIA University

Train your own AI with the Segmentation AI Author: Ovarian Cancer Example

This MIKAIA® University app note demonstrates how to quickly and interactively train your own AI using just a few training annotations, all in a matter of minutes. In the app center, select the Segmentation AI Author App, click “+” to...

Michaela Benz

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Digital Pathology Life Science MIKAIA University

Segmentation AI Author Example: Train H&E Vulvar Cancer AI Based on Aligned IHC Serial Sections

This MIKAIA® University app note illustrates how to interactively train a new H&E segmentation AI with serial sections, without having to annotate tumor regions. Instead, an IHC epithelial marker (pan-cytokeratin AE1/AE3) is thresholded through...

Michaela Benz

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Digital Pathology Life Science MIKAIA University Spatial Biology

MIKAIA’s Slide Alignment: An Overview

With the upcoming MIKAIA® 3 release (scheduled for Q1 2026), MIKAIA® will receive a new multi-omics slide alignment module, “MIKAIA® Slide Align“. Based on a 3-phase registration process, the last one being a non-rigid deformation for...

Volker Bruns

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Category - Life Science

Common category to topics from Digital Pathology, Computational Pathology, Spatial Biology as well as applications and technologies left and right.

Digital Pathology

Spatial Biology

Life Science Spatial Biology

Programming-free Single Cell Analysis of CODEX TMA with MIKAIA

CODEX, now called PhenoCycler, by Akoya Biosciences, along with other sequential immunofluorescence technologies (e.g., Lunaphore (Comet), Miltenyi Biotech (MACSima), Leica Microsystems (Cell DIVE), or other vendors)...

Volker Bruns

December 18, 2024

Digital Pathology MIKAIA University Spatial Biology

MIKAIA University

MIKAIA® University is the central MIKAIA® learning portal.
You will find various app notes and video tutorials that outline typical MIKAIA® workflows.

Volker Bruns

December 17, 2024

Digital Pathology Life Science

Quantify Histological Growth Pattern or Spatial Heterogeneity with the Grid Analysis App

Result of Grid Analysis App shows histological growth pattern and spatial heterogeneity

Volker Bruns

December 10, 2024

Digital Pathology Life Science MIKAIA University

MIKAIA AI Author: Create New AI and Batch-analyze an Entire Dataset

MIKAIA® AI Author used for Digital Pathology batch analysis

Michaela Benz

December 10, 2024

Digital Pathology Life Science Spatial Biology

2 Articles in Trillium Pathology 2024

We have contributed two article’s to this year’s Trillium Pathology issue. Here are the abstracts, with links to the full articles: V. Bruns, Programming-free Image-Analysis Workflows for IHC, IF and Spatial...

Volker Bruns

July 30, 2024

Digital Pathology Life Science

MIKAIA Plugin API: “Plug in your own AI”

This app note describes the MIKAIA Plugin API. It can be used by bioinformaticians to plug in their own AI script, e.g., written in Python or any other language, into MIKAIA® and this way put their AI into the hands of...

Volker Bruns

July 26, 2024

Digital Pathology Life Science

IHC Staining and Molecular Biomarkers

Cancer is a major cause of mortality worldwide, and the evaluation of predictive and prognostic markers is crucial in its pathologic assessment. Immunohistochemistry (IHC) is commonly used to evaluate biomarker status...

Nathalie Falk

July 21, 2024

Digital Pathology Life Science MIKAIA University

MIKAIA: Build H&E Analysis using Multiple AIs

MIKAIA® is specifically designed for researchers in academia, CROs, biotech, pharma. One of the challenges is that researchers by design do unique things. For this reason, MIKAIA® apps do not represent individual side...

Volker Bruns

July 17, 2024

Digital Pathology Life Science MIKAIA University

MIKAIA: Differential IHC Cell Detection by ROI

This article is based on a our presentation “IHC Cell Analysis — More than just Cell Counting: A proposed Workflow” at the European Conference for Digital Pathology (ECDP) 2024 in Vilnius, Lithuania...

Volker Bruns

July 16, 2024

DNA string visualizing our Medical Buzzwords glossary

Digital Health Digital Pathology Spatial Biology

Glossary of Medical Buzzwords

In the fast-paced world of healthcare, staying informed about the latest medical buzzwords and trends is essential to understanding where the future of medicine is heading. From computer-aided diagnosis and personalized...

Julia Fröhlich

July 15, 2024

Category - Life Science

Digital Health

Life Science

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