{"id":4987,"date":"2026-01-16T12:48:50","date_gmt":"2026-01-16T11:48:50","guid":{"rendered":"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/?p=4987"},"modified":"2026-01-27T20:44:08","modified_gmt":"2026-01-27T19:44:08","slug":"train-your-own-ai","status":"publish","type":"post","link":"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/train-your-own-ai\/","title":{"rendered":"Train your own AI with the Segmentation AI Author: Ovarian Cancer Example"},"content":{"rendered":"\n<p>This <a href=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/mikaia-university\/\">MIKAIA<sup>\u00ae<\/sup> University<\/a> app note demonstrates how to quickly and interactively train your own AI using just a few training annotations, all in a matter of minutes. <\/p>\n\n\n<div class=\"wp-block-image\">\n<figure class=\"aligncenter size-large\"><img decoding=\"async\" width=\"1024\" height=\"84\" src=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-1024x84.jpg\" alt=\"Information: This feature will soon be available in MIKAIA v3.\" class=\"wp-image-5022\" srcset=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-1024x84.jpg 1024w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-300x25.jpg 300w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-768x63.jpg 768w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-1536x126.jpg 1536w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-2048x168.jpg 2048w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-370x30.jpg 370w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-270x22.jpg 270w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-570x47.jpg 570w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA_v3_Hinweis-740x61.jpg 740w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/><\/figure>\n<\/div>\n\n\n<p>In the app center, select the Segmentation AI Author App, click &#8220;+&#8221; to create a new trainable AI, and pick a name. Then, add the tissue classes you want the AI to recognize. In this example. we annotated &#8220;Tumor&#8221;, &#8220;Necrosis&#8221;, &#8220;Stroma&#8221;, &#8220;Background&#8221;, &#8220;Inflammation&#8221;, and &#8220;Other&#8221;. Next, create a few small training annotations. If a class has several slightly different appearances, it is best to draw multiple small annotations. The screenshot below  shows the training annotations.<\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><img decoding=\"async\" width=\"1024\" height=\"550\" src=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-1024x550.jpg\" alt=\"screenshot of raining annotations for six tissue classes\" class=\"wp-image-4989\" srcset=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-1024x550.jpg 1024w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-300x161.jpg 300w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-768x413.jpg 768w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-1536x826.jpg 1536w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-370x199.jpg 370w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-270x145.jpg 270w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-570x306.jpg 570w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno-740x398.jpg 740w, https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Trainingsanno.jpg 1920w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/><figcaption class=\"wp-element-caption\">Training annotations for six tissue classes (here only max three annotations per class) created by hand<\/figcaption><\/figure>\n\n\n\n<p>Now, click &#8220;train.&#8221; The Segmentation AI Author app will use its foundation model backend to extract features from the training annotations and derive a prototypical representation of each class in the high-dimensional feature space. No actual &#8220;AI training&#8221; in the technical sense is happening here, so the training phase typically only takes less than a minute.<\/p>\n\n\n\n<p>The features can be visualized in a t-SNE or UMAP plot: <\/p>\n\n\n\n<figure class=\"wp-block-video\"><video height=\"1080\" style=\"aspect-ratio: 1920 \/ 1080;\" width=\"1920\" autoplay controls loop muted src=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/MIKAIA-Segmentation-AI-Author-Ovar-Animated-t-SNE.mp4\" playsinline><\/video><\/figure>\n\n\n\n<p>Now that the AI model has been trained, we can put it to the test and test-analyze a region in the same or a different slide:<\/p>\n\n\n\n\t\t\t\n\t<style type=\"text\/css\">\n\t\t.slider-info-4991.bafg-slider-info .bafg-slider-title {\n\t\t\t\t\t\t\tfont-size:\n\t\t\t\t\t22px\t\t\t\t;\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\n\t\t.slider-info-4991.bafg-slider-info .bafg-slider-description {\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\t\t\n\t\t\n\t\t.slider-info-4991.bafg-slider-info .bafg_slider_readmore_button {\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\ttext-align: center;\n\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\n\t\t.slider-info-4991.bafg-slider-info .bafg_slider_readmore_button:hover {\n\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\t<\/style>\n\t\n\t\t\t<div class=\"bafg-twentytwenty-container slider-4991  \"\n\t\t\t\tbafg-orientation=\"horizontal\" bafg-default-offset=\"0.5\"\n\t\t\t\tbafg-before-label=\"Before\"\n\t\t\t\tbafg-after-label=\"After\" bafg-overlay=\"1\"\n\t\t\t\tbafg-move-slider-on-hover=\"\"\n\t\t\t\tbafg-click-to-move=\"\">\n\n\t\t\t\t\t\t\t\t<img class=\"skip-lazy\" data-skip-lazy\t\t\t\t\tsrc=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Segmentation_Overlay_opac_zoom_orig.jpg\" alt=\"\">\n\t\t\t\t<img class=\"skip-lazy\" data-skip-lazy\t\t\t\t\tsrc=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Ovar_Segmentation_Overlay_opac_zoom.jpg\" alt=\"\">\n\n\t\t\t<\/div>\n\n\t\t\t\t<div class=\"bafg-slider-info-wraper\">\n\t\t<div style=\"\" class=\"slider-info-4991 bafg-slider-info\">\n\t\t\t\t\t<\/div>\n\t<\/div>\n\t\n\t\t\t<style type=\"text\/css\">\n\t\t\t\t\t\t\t\t\t\t\t<\/style>\n\t\t\t\n\n\n\n<p><\/p>\n\n\n\n<p>Here is another region:<\/p>\n\n\n\n\t\t\t\n\t<style type=\"text\/css\">\n\t\t.slider-info-4994.bafg-slider-info .bafg-slider-title {\n\t\t\t\t\t\t\tfont-size:\n\t\t\t\t\t22px\t\t\t\t;\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\n\t\t.slider-info-4994.bafg-slider-info .bafg-slider-description {\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\t\t\n\t\t\n\t\t.slider-info-4994.bafg-slider-info .bafg_slider_readmore_button {\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\ttext-align: center;\n\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\n\t\t.slider-info-4994.bafg-slider-info .bafg_slider_readmore_button:hover {\n\n\t\t\t\n\t\t\t\n\t\t\t\t\t}\n\t<\/style>\n\t\n\t\t\t<div class=\"bafg-twentytwenty-container slider-4994  \"\n\t\t\t\tbafg-orientation=\"horizontal\" bafg-default-offset=\"0.5\"\n\t\t\t\tbafg-before-label=\"Before\"\n\t\t\t\tbafg-after-label=\"After\" bafg-overlay=\"1\"\n\t\t\t\tbafg-move-slider-on-hover=\"\"\n\t\t\t\tbafg-click-to-move=\"\">\n\n\t\t\t\t\t\t\t\t<img class=\"skip-lazy\" data-skip-lazy\t\t\t\t\tsrc=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Seg-AI-Author-Ovar-cancer-V2_Result_original.jpg\" alt=\"\">\n\t\t\t\t<img class=\"skip-lazy\" data-skip-lazy\t\t\t\t\tsrc=\"https:\/\/websites.fraunhofer.de\/smart-sensing-insights\/wp-content\/uploads\/2026\/01\/Seg-AI-Author-Ovar-cancer-V2_Result_overlay.jpg\" alt=\"\">\n\n\t\t\t<\/div>\n\n\t\t\t\t<div class=\"bafg-slider-info-wraper\">\n\t\t<div style=\"\" class=\"slider-info-4994 bafg-slider-info\">\n\t\t\t\t\t<\/div>\n\t<\/div>\n\t\n\t\t\t<style type=\"text\/css\">\n\t\t\t\t\t\t\t\t\t\t\t<\/style>\n\t\t\t\n\n\n\n<p><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Try it out yourself: Evaluate MIKAIA<sup>\u00ae<\/sup><\/h2>\n\n\n\n<p>If you are interested in trying this or any other of the MIKAIA<sup>\u00ae<\/sup> studio apps, please reach out to us at <a href=\"mailto:mikaia@iis.fraunhofer.de\">mikaia@iis.fraunhofer.de<\/a>. We would love to learn about your use case, provide a demo, and afterwards share a set of voucher codes that allow you to explore the apps that are locked in MIKAIA<sup>\u00ae<\/sup> lite.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\"><strong>Contributors &amp; partners<\/strong><\/h2>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Institute of Pathology, Erlangen University Hospital, Comprehensive Cancer Center Erlangen\u2013European Metropolitan Area of Nuremberg (CCC ER-EMN), Bavarian Cancer Research Center (BZKF), Friedrich-Alexander-Universit\u00e4t Erlangen-N\u00fcrnberg, Krankenhausstrasse 8\u201310, 91054 Erlangen, Germany<\/li>\n\n\n\n<li>Department of Gynecology and Obstetrics, Erlangen University Hospital, Comprehensive Cancer Center Erlangen\u2013European Metropolitan Area of Nuremberg (CCC ER-EMN), Bavarian Cancer Research Center (BZKF), Erlangen, Friedrich-Alexander-Universit\u00e4t Erlangen-N\u00fcrnberg, Universitaetsstrasse 21\u201323, 91054 Erlangen, Germany<\/li>\n<\/ul>\n\n\n\n<h2 class=\"wp-block-heading\">Funding<\/h2>\n\n\n\n<p>This MIKAIA<sup>\u00ae<\/sup> extension has been kindly made possible thanks to venture capital provided by the <strong><a href=\"https:\/\/www.fraunhofer-zukunftsstiftung.de\/\">Fraunhofer Future Foundation <\/a><\/strong>(Fraunhofer Zukunfsstiftung). Project: &#8220;Histology AI Author&#8221;, consortium: Fraunhofer IIS &amp; Fraunhofer MEVIS.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>This MIKAIA\u00ae University app note demonstrates how to quickly and interactively train your own AI using just a few training annotations, all in a matter of minutes. In the app center, select the Segmentation AI Author App, click &#8220;+&#8221; to create a new trainable AI, and pick a name. Then, add the tissue classes you [&hellip;]<\/p>\n","protected":false},"author":4,"featured_media":4997,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[3,35,28],"tags":[37,7,29,109,111],"coauthors":[57],"class_list":["post-4987","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-digital-pathology","category-life-science","category-mikaia-university","tag-ai","tag-mikaia","tag-mikaia-app-note","tag-use-case","tag-workflow"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Train your own AI with the Segmentation AI Author: Ovarian Cancer Example<\/title>\n<meta name=\"description\" content=\"The MIKAIA Segmentation AI Author lets you train your own Digital Pathology AI in just minutes and based on only a handful of training annotations.\" \/>\n<meta name=\"robots\" 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